3D structure

PDB id
10ZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Yeast co-transcriptional pre-60S assembly intermediate Pwp1 RNP
Experimental method
ELECTRON MICROSCOPY
Resolution
2.74 Å

Loop

Sequence
GUAAAUUC
Length
8 nucleotides
Bulged bases
10ZY|1|1|A|307, 10ZY|1|1|U|309
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

10ZY|1|1|G|304
10ZY|1|1|U|305
10ZY|1|1|A|306
10ZY|1|1|A|307
10ZY|1|1|A|308
10ZY|1|1|U|309
10ZY|1|1|U|310
10ZY|1|1|C|311

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain b
Ribosome biogenesis protein BRX1
Chain m
rRNA-processing protein EBP2

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.1111 s