HL_11BQ_008

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

11BQ|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11BQ_008 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1115

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

11BQ|1|A|C|342
11BQ|1|A|U|343
11BQ|1|A|A|344
11BQ|1|A|C|345
11BQ|1|A|G|346
11BQ|1|A|G|347

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain j

Large ribosomal subunit protein uL14

Chain o

Large ribosomal subunit protein bL19