HL_11EL_011

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

11EL|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11EL_011 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.2006

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

11EL|1|A|G|462
11EL|1|A|U|463
11EL|1|A|U|464
11EL|1|A|A|465
11EL|1|A|A|466
11EL|1|A|U|467
11EL|1|A|A|468
11EL|1|A|C|469
11EL|1|A|C|470

Current chains

Chain A

16S ribosomal RNA

Nearby chains