HL_11EL_028
3D structure
- PDB id
- 11EL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAUCAGAAUGU
- Length
- 11 nucleotides
- Bulged bases
- 11EL|1|A|U|1365
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11EL_028 not in the Motif Atlas
- Homologous match to HL_6CZR_101
- Geometric discrepancy: 0.18
- The information below is about HL_6CZR_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
11EL|1|A|A|1357
11EL|1|A|A|1358
11EL|1|A|U|1359
11EL|1|A|C|1360
11EL|1|A|A|1361
11EL|1|A|G|1362
11EL|1|A|A|1363
11EL|1|A|A|1364
11EL|1|A|U|1365
11EL|1|A|G|1366
11EL|1|A|U|1367
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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