HL_11EL_070

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

11EL|1|a|U|1729, 11EL|1|a|C|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11EL_070 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.3906

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.4

Basepair signature

cWW-F

Number of instances in this motif group

48

Unit IDs

11EL|1|a|C|1728
11EL|1|a|U|1729
11EL|1|a|C|1730
11EL|1|a|G|1731

Current chains

Chain a

23S ribosomal RNA

Nearby chains