HL_11EL_093

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

11EL|1|a|U|2797, 11EL|1|a|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11EL_093 not in the Motif Atlas

Geometric match to HL_8P9A_179

Geometric discrepancy: 0.234

The information below is about HL_8P9A_179

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_58375.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

11EL|1|a|C|2795
11EL|1|a|U|2796
11EL|1|a|U|2797
11EL|1|a|U|2798
11EL|1|a|A|2799
11EL|1|a|A|2800
11EL|1|a|G|2801

Current chains

Chain a

23S ribosomal RNA

Nearby chains