HL_11FV_023

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

11FV|1|C|U|1024

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11FV_023 not in the Motif Atlas

Geometric match to HL_5LYS_002

Geometric discrepancy: 0.2124

The information below is about HL_5LYS_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

11FV|1|C|C|1022
11FV|1|C|U|1023
11FV|1|C|U|1024
11FV|1|C|C|1025
11FV|1|C|G|1026
11FV|1|C|G|1027

Current chains

Chain C

16S ribosomal RNA

Nearby chains