HL_11FV_048

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCUUAGGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|C|542
11FV|1|I|G|543
11FV|1|I|C|544
11FV|1|I|U|545
11FV|1|I|U|546
11FV|1|I|A|547
11FV|1|I|G|548
11FV|1|I|G|549
11FV|1|I|C|550
11FV|1|I|G|551

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain R

Large ribosomal subunit protein uL13

Chain Z

Large ribosomal subunit protein bL21