HL_11HE_042
3D structure
- PDB id
- 11HE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV closed
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UUUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 11HE|1|28|A|3642, 11HE|1|28|A|3643, 11HE|1|28|U|3644, 11HE|1|28|A|3648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11HE_042 not in the Motif Atlas
- Homologous match to HL_9H3G_049
- Geometric discrepancy: 0.0727
- The information below is about HL_9H3G_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.4
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 11
Unit IDs
11HE|1|28|U|3639
11HE|1|28|U|3640
11HE|1|28|U|3641
11HE|1|28|A|3642
11HE|1|28|A|3643
11HE|1|28|U|3644
11HE|1|28|U|3645
11HE|1|28|A|3646
11HE|1|28|A|3647
11HE|1|28|A|3648
11HE|1|28|A|3649
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 37
- 60S ribosomal protein L37
- Chain L8
- 60S ribosomal protein L8
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