HL_11HG_013

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUCCACUUUAAAUCCUUUAACGAGGAUC

Length

30 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|18|G|563
11HG|1|18|A|564
11HG|1|18|G|565
11HG|1|18|U|566
11HG|1|18|C|567
11HG|1|18|C|568
11HG|1|18|A|569
11HG|1|18|C|570
11HG|1|18|U|571
11HG|1|18|U|572
11HG|1|18|U|573
11HG|1|18|A|574
11HG|1|18|A|575
11HG|1|18|A|576
11HG|1|18|U|577
11HG|1|18|C|578
11HG|1|18|C|579
11HG|1|18|U|580
11HG|1|18|U|581
11HG|1|18|U|582
11HG|1|18|A|583
11HG|1|18|A|584
11HG|1|18|C|585
11HG|1|18|G|586
11HG|1|18|A|587
11HG|1|18|G|588
11HG|1|18|G|589
11HG|1|18|A|590
11HG|1|18|U|591
11HG|1|18|C|592

Current chains

Chain 18

18S rRNA

Nearby chains

Chain S4

40S ribosomal protein S4

Chain S9

40S ribosomal protein S9

Chain SS

40S ribosomal protein S24

Chain YY

40S ribosomal protein S30