HL_11HG_018

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

11HG|1|18|U|888

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|18|C|884
11HG|1|18|U|885
11HG|1|18|A|886
11HG|1|18|U|887
11HG|1|18|U|888
11HG|1|18|U|889
11HG|1|18|U|890
11HG|1|18|G|891
11HG|1|18|U|892
11HG|1|18|U|893
11HG|1|18|G|894
11HG|1|18|G|895
11HG|1|18|U|896
11HG|1|18|U|897
11HG|1|18|U|898
11HG|1|18|U|899
11HG|1|18|C|900
11HG|1|18|G|901
11HG|1|18|G|902

Current chains

Chain 18

18S rRNA

Nearby chains

Chain DD

Small ribosomal subunit protein uS17

Chain S6

40S ribosomal protein S6