HL_11HG_090

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11HG_090 not in the Motif Atlas

Homologous match to HL_9PN5_061

Geometric discrepancy: 0.1298

The information below is about HL_9PN5_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02262.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

38

Unit IDs

11HG|1|28|U|4497
11HG|1|28|U|4498
11HG|1|28|G|4499
11HG|1|28|U|4500
11HG|1|28|U|4501
11HG|1|28|C|4502
11HG|1|28|A|4503

Current chains

Chain 28

28s rRNA

Nearby chains

Chain L3

60S ribosomal protein L3