HL_11HG_099

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

11HG|1|58|C|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|58|G|121
11HG|1|58|G|122
11HG|1|58|U|123
11HG|1|58|U|124
11HG|1|58|C|125
11HG|1|58|C|126
11HG|1|58|U|127
11HG|1|58|C|128
11HG|1|58|C|129

Current chains

Chain 58

5.8S rRNA

Nearby chains

Chain 28

Large subunit ribosomal RNA; LSU rRNA

Chain cc

Large ribosomal subunit protein uL23