HL_11KH_052

3D structure

PDB id

11KH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

11KH|1|28|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11KH|1|28|G|1761
11KH|1|28|C|1762
11KH|1|28|C|1763
11KH|1|28|G|1764
11KH|1|28|A|1765
11KH|1|28|A|1766
11KH|1|28|A|1767
11KH|1|28|C|1768
11KH|1|28|G|1769
11KH|1|28|A|1770
11KH|1|28|U|1771
11KH|1|28|C|1772

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 11

60S ribosomal protein L11

Chain HH

40S ribosomal protein S15