HL_11KH_056

3D structure

PDB id

11KH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

11KH|1|28|G|1981, 11KH|1|28|G|1982

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11KH|1|28|G|1973
11KH|1|28|U|1974
11KH|1|28|G|1975
11KH|1|28|G|1976
11KH|1|28|C|1977
11KH|1|28|C|1978
11KH|1|28|A|1979
11KH|1|28|U|1980
11KH|1|28|G|1981
11KH|1|28|G|1982
11KH|1|28|A|1983
11KH|1|28|A|1984
11KH|1|28|G|1985
11KH|1|28|U|1986
11KH|1|28|C|1987
11KH|1|28|G|1988
11KH|1|28|G|1989
11KH|1|28|A|1990
11KH|1|28|A|1991
11KH|1|28|U|1992
11KH|1|28|C|1993

Current chains

Chain 28

28S rRNA

Nearby chains

Chain s

60S acidic ribosomal protein P0

Chain t

uL11