HL_11KH_057

3D structure

PDB id

11KH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGUGUGUAACAACUC

Length

16 nucleotides

Bulged bases

11KH|1|28|A|2002

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11KH|1|28|G|2001
11KH|1|28|A|2002
11KH|1|28|G|2003
11KH|1|28|U|2004
11KH|1|28|G|2005
11KH|1|28|U|2006
11KH|1|28|G|2007
11KH|1|28|U|2008
11KH|1|28|A|2009
11KH|1|28|A|2010
11KH|1|28|C|2011
11KH|1|28|A|2012
11KH|1|28|A|2013
11KH|1|28|C|2014
11KH|1|28|U|2015
11KH|1|28|C|2016

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 40

Large ribosomal subunit protein eL40

Chain s

60S acidic ribosomal protein P0

Chain t

uL11