HL_11KH_083
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11KH_083 not in the Motif Atlas
- Homologous match to HL_8GLP_063
- Geometric discrepancy: 0.1714
- The information below is about HL_8GLP_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_15296.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
11KH|1|28|U|4301
11KH|1|28|U|4302
11KH|1|28|C|4303
11KH|1|28|A|4304
11KH|1|28|G|4305
11KH|1|28|U|4306
11KH|1|28|A|4307
11KH|1|28|C|4308
11KH|1|28|G|4309
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 21
- 60S ribosomal protein L21
- Chain 42
- eL42
- Chain Q
- Large ribosomal subunit protein eL18
- Chain dd
- 60S ribosomal protein L27a
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