HL_12DQ_127
3D structure
- PDB id
- 12DQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Thermus thermophilus 70S ribosome in complex with sparsomycin, protein Y, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- GCGUAAUAGC
- Length
- 10 nucleotides
- Bulged bases
- 12DQ|1|2A|C|1092, 12DQ|1|2A|A|1095, 12DQ|1|2A|A|1096
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
12DQ|1|2A|G|1091
12DQ|1|2A|C|1092
12DQ|1|2A|G|1093
12DQ|1|2A|U|1094
12DQ|1|2A|A|1095
12DQ|1|2A|A|1096
12DQ|1|2A|U|1097
12DQ|1|2A|A|1098
12DQ|1|2A|G|1099
12DQ|1|2A|C|1100
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 29
- 50S ribosomal protein L36
- Chain 2H
- 50S ribosomal protein L6
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