HL_1ASZ_006

3D structure

PDB id

1ASZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTION

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

G(5MU)(PSU)CAAUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1ASZ_006 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1366

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

1ASZ|1|S|G|653
1ASZ|1|S|5MU|654
1ASZ|1|S|PSU|655
1ASZ|1|S|C|656
1ASZ|1|S|A|657
1ASZ|1|S|A|658
1ASZ|1|S|U|659
1ASZ|1|S|U|660
1ASZ|1|S|C|661

Current chains

Chain S

T-RNA (75-MER)

Nearby chains