HL_1E8O_001
3D structure
- PDB id
- 1E8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Core of the Alu domain of the mammalian SRP
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUGGCGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.4
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
1E8O|1|E|G|110
1E8O|1|E|G|111
1E8O|1|E|U|112
1E8O|1|E|G|113
1E8O|1|E|G|114
1E8O|1|E|C|115
1E8O|1|E|G|116
1E8O|1|E|C|117
Current chains
- Chain E
- 7SL RNA
Nearby chains
- Chain A
- SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN
- Chain B
- SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN
- Chain D
- SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN
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