HL_1EIY_006

3D structure

PDB id

1EIY (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUCGAUUC

Length

9 nucleotides

Bulged bases

1EIY|1|C|C|56||||4_555, 1EIY|1|C|G|57||||4_555, 1EIY|1|C|U|59||||4_555, 1EIY|1|C|U|60||||4_555

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1EIY_006 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.2218

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

1EIY|1|C|G|53||||4_555
1EIY|1|C|U|54||||4_555
1EIY|1|C|U|55||||4_555
1EIY|1|C|C|56||||4_555
1EIY|1|C|G|57||||4_555
1EIY|1|C|A|58||||4_555
1EIY|1|C|U|59||||4_555
1EIY|1|C|U|60||||4_555
1EIY|1|C|C|61||||4_555

Current chains

Chain C

TRNA(PHE)

Nearby chains

Chain A

PHENYLALANYL-TRNA SYNTHETASE