HL_1F7V_002

3D structure

PDB id

1F7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUICGAAC

Length

9 nucleotides

Bulged bases

1F7V|1|B|U|933, 1F7V|1|B|C|935, 1F7V|1|B|G|936, 1F7V|1|B|A|938

QA status

Modified nucleotides:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1F7V_002 not in the Motif Atlas

Geometric match to HL_4TUW_002

Geometric discrepancy: 0.1721

The information below is about HL_4TUW_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

1F7V|1|B|G|931
1F7V|1|B|C|932
1F7V|1|B|U|933
1F7V|1|B|I|934
1F7V|1|B|C|935
1F7V|1|B|G|936
1F7V|1|B|A|937
1F7V|1|B|A|938
1F7V|1|B|C|939

Current chains

Chain B

TRNA(ARG)

Nearby chains

Chain A

ARGINYL-TRNA SYNTHETASE