HL_1FFZ_001

3D structure

PDB id

1FFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUGCGGAGUC

Length

10 nucleotides

Bulged bases

1FFZ|1|A|C|2071, 1FFZ|1|A|G|2072, 1FFZ|1|A|G|2073

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FFZ_001 not in the Motif Atlas

Homologous match to HL_4V9F_052

Geometric discrepancy: 0.1077

The information below is about HL_4V9F_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

10

Unit IDs

1FFZ|1|A|G|2068
1FFZ|1|A|U|2069
1FFZ|1|A|G|2070
1FFZ|1|A|C|2071
1FFZ|1|A|G|2072
1FFZ|1|A|G|2073
1FFZ|1|A|A|2074
1FFZ|1|A|G|2075
1FFZ|1|A|U|2076
1FFZ|1|A|C|2077

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains