HL_1FG0_001

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGCGGAGUC

Length

10 nucleotides

Bulged bases

1FG0|1|A|C|2071, 1FG0|1|A|G|2072, 1FG0|1|A|G|2073

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FG0_001 not in the Motif Atlas

Homologous match to HL_4V9F_052

Geometric discrepancy: 0.0613

The information below is about HL_4V9F_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

1FG0|1|A|G|2068
1FG0|1|A|U|2069
1FG0|1|A|G|2070
1FG0|1|A|C|2071
1FG0|1|A|G|2072
1FG0|1|A|G|2073
1FG0|1|A|A|2074
1FG0|1|A|G|2075
1FG0|1|A|U|2076
1FG0|1|A|C|2077

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains