HL_1FG0_009

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FG0_009 not in the Motif Atlas

Homologous match to HL_4V9F_060

Geometric discrepancy: 0.047

The information below is about HL_4V9F_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

1FG0|1|A|C|2411
1FG0|1|A|G|2412
1FG0|1|A|A|2413
1FG0|1|A|A|2414
1FG0|1|A|A|2415
1FG0|1|A|G|2416

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains