HL_1FG0_011

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGCACAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FG0_011 not in the Motif Atlas

Homologous match to HL_4V9F_062

Geometric discrepancy: 0.1094

The information below is about HL_4V9F_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

1FG0|1|A|A|2506
1FG0|1|A|G|2507
1FG0|1|A|C|2508
1FG0|1|A|A|2509
1FG0|1|A|C|2510
1FG0|1|A|A|2511
1FG0|1|A|U|2512
1FG0|1|A|A|2513
1FG0|1|A|U|2514

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains