HL_1FJG_030

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUCAGCCAUGC

Length

12 nucleotides

Bulged bases

1FJG|1|A|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36151.1

Basepair signature

cWW-cWW-tWW-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

1FJG|1|A|G|1356
1FJG|1|A|A|1357
1FJG|1|A|U|1358
1FJG|1|A|C|1359
1FJG|1|A|A|1360
1FJG|1|A|G|1361
1FJG|1|A|C|1361|||A
1FJG|1|A|C|1362
1FJG|1|A|A|1363
1FJG|1|A|U|1364
1FJG|1|A|G|1365
1FJG|1|A|C|1366

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain I

30S RIBOSOMAL PROTEIN S9

Chain J

30S RIBOSOMAL PROTEIN S10

Chain M

30S RIBOSOMAL PROTEIN S13

Chain N

30S RIBOSOMAL PROTEIN S14

Chain V

30S RIBOSOMAL PROTEIN THX