HL_1FJG_033

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCCGCGAGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FJG_033 not in the Motif Atlas

Geometric match to HL_7A0S_011

Geometric discrepancy: 0.2943

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

1FJG|1|A|C|1028
1FJG|1|A|C|1029
1FJG|1|A|C|1030
1FJG|1|A|G|1030|||A
1FJG|1|A|C|1030|||B
1FJG|1|A|G|1030|||C
1FJG|1|A|A|1030|||D
1FJG|1|A|G|1031
1FJG|1|A|G|1032
1FJG|1|A|G|1033

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains