HL_1FKA_033
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGG
- Length
- 40 nucleotides
- Bulged bases
- 1FKA|1|A|C|492, 1FKA|1|A|A|493, 1FKA|1|A|A|494, 1FKA|1|A|G|501, 1FKA|1|A|A|507, 1FKA|1|A|G|514, 1FKA|1|A|U|515, 1FKA|1|A|A|516, 1FKA|1|A|A|517, 1FKA|1|A|U|518, 1FKA|1|A|A|519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|C|487
1FKA|1|A|C|488
1FKA|1|A|G|489
1FKA|1|A|G|490
1FKA|1|A|C|491
1FKA|1|A|C|492
1FKA|1|A|A|493
1FKA|1|A|A|494
1FKA|1|A|C|495
1FKA|1|A|U|496
1FKA|1|A|C|497
1FKA|1|A|C|498
1FKA|1|A|G|499
1FKA|1|A|U|500
1FKA|1|A|G|501
1FKA|1|A|C|502
1FKA|1|A|C|503
1FKA|1|A|A|504
1FKA|1|A|G|505
1FKA|1|A|C|506
1FKA|1|A|A|507
1FKA|1|A|G|508
1FKA|1|A|C|509
1FKA|1|A|C|510
1FKA|1|A|G|511
1FKA|1|A|C|512
1FKA|1|A|G|513
1FKA|1|A|G|514
1FKA|1|A|U|515
1FKA|1|A|A|516
1FKA|1|A|A|517
1FKA|1|A|U|518
1FKA|1|A|A|519
1FKA|1|A|C|520
1FKA|1|A|G|521
1FKA|1|A|G|522
1FKA|1|A|A|523
1FKA|1|A|G|524
1FKA|1|A|G|525
1FKA|1|A|G|526
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain L
- 30S RIBOSOMAL PROTEIN S12
Coloring options: