HL_1FKA_049

3D structure

PDB id

1FKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCGGGAGCCUACGGGCAGG

Length

19 nucleotides

Bulged bases

1FKA|1|A|G|1421, 1FKA|1|A|G|1422, 1FKA|1|A|A|1423, 1FKA|1|A|G|1424, 1FKA|1|A|C|1425, 1FKA|1|A|A|1428, 1FKA|1|A|C|1429, 1FKA|1|A|G|1430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FKA|1|A|C|1418
1FKA|1|A|C|1419
1FKA|1|A|G|1420
1FKA|1|A|G|1421
1FKA|1|A|G|1422
1FKA|1|A|A|1423
1FKA|1|A|G|1424
1FKA|1|A|C|1425
1FKA|1|A|C|1426
1FKA|1|A|U|1427
1FKA|1|A|A|1428
1FKA|1|A|C|1429
1FKA|1|A|G|1430
1FKA|1|A|G|1431
1FKA|1|A|G|1432
1FKA|1|A|C|1433
1FKA|1|A|A|1434
1FKA|1|A|G|1435
1FKA|1|A|G|1436

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20