HL_1G59_003

3D structure

PDB id

1G59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

GLUTAMYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(GLU).

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GUUCGAUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1G59_003 not in the Motif Atlas

Geometric match to HL_1N78_003

Geometric discrepancy: 0.1358

The information below is about HL_1N78_003

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_33597.4

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

137

Unit IDs

1G59|1|B|G|553
1G59|1|B|U|554
1G59|1|B|U|555
1G59|1|B|C|556
1G59|1|B|G|557
1G59|1|B|A|558
1G59|1|B|U|559
1G59|1|B|U|560
1G59|1|B|C|561

Current chains

Chain B

TRNA(GLU)

Nearby chains