HL_1H4Q_001

3D structure

PDB id

1H4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Prolyl-tRNA synthetase from Thermus thermophilus complexed with tRNApro(CGG), ATP and prolinol

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAGCCCGGUAG

Length

11 nucleotides

Bulged bases

1H4Q|1|T|C|16, 1H4Q|1|T|G|18

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1H4Q_001 not in the Motif Atlas

Homologous match to HL_1H4S_001

Geometric discrepancy: 0.0393

The information below is about HL_1H4S_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_80411.1

Basepair signature

cWW-F-cSH-F-F-F-F

Number of instances in this motif group

1

Unit IDs

1H4Q|1|T|C|13
1H4Q|1|T|A|14
1H4Q|1|T|G|15
1H4Q|1|T|C|16
1H4Q|1|T|C|17
1H4Q|1|T|C|17|||A
1H4Q|1|T|G|18
1H4Q|1|T|G|19
1H4Q|1|T|U|20
1H4Q|1|T|A|21
1H4Q|1|T|G|22

Current chains

Chain T

TRNAPRO(CGG)

Nearby chains