HL_1I94_002

3D structure

PDB id

1I94 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUUUAC

Length

7 nucleotides

Bulged bases

1I94|1|A|U|80, 1I94|1|A|U|81

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I94_002 not in the Motif Atlas

Geometric match to HL_5WTI_001

Geometric discrepancy: 0.3712

The information below is about HL_5WTI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

1I94|1|A|G|78
1I94|1|A|U|79
1I94|1|A|U|80
1I94|1|A|U|81
1I94|1|A|U|82
1I94|1|A|A|83
1I94|1|A|C|84

Current chains

Chain A

16S RRNA

Nearby chains