HL_1I94_012

3D structure

PDB id

1I94 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I94_012 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.2348

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

1I94|1|A|C|452
1I94|1|A|G|453
1I94|1|A|A|454
1I94|1|A|C|455
1I94|1|A|G|456
1I94|1|A|A|457
1I94|1|A|G|458

Current chains

Chain A

16S RRNA

Nearby chains

Chain P

30S RIBOSOMAL PROTEIN S16