HL_1I94_035

3D structure

PDB id

1I94 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

1I94|1|A|U|1118, 1I94|1|A|C|1119, 1I94|1|A|G|1121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I94_035 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.4546

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

1I94|1|A|G|1116
1I94|1|A|U|1117
1I94|1|A|U|1118
1I94|1|A|C|1119
1I94|1|A|G|1120
1I94|1|A|G|1121
1I94|1|A|C|1122

Current chains

Chain A

16S RRNA

Nearby chains