3D structure

PDB id
1I97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
CCAACUCCGUGCCAGCAG
Length
18 nucleotides
Bulged bases
1I97|1|A|C|501
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1I97|1|A|C|490
1I97|1|A|C|491
1I97|1|A|A|492
1I97|1|A|A|493
1I97|1|A|C|494
1I97|1|A|U|495
1I97|1|A|C|496
1I97|1|A|C|497
1I97|1|A|G|498
1I97|1|A|U|499
1I97|1|A|G|500
1I97|1|A|C|501
1I97|1|A|C|502
1I97|1|A|A|503
1I97|1|A|G|504
1I97|1|A|C|505
1I97|1|A|A|506
1I97|1|A|G|507

Current chains

Chain A
16S RRNA

Nearby chains

Chain D
30S RIBOSOMAL PROTEIN S4
Chain L
30S RIBOSOMAL PROTEIN S12

Coloring options:

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