HL_1I9V_002

3D structure

PDB id

1I9V (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GACUGAA(YG)AC*C

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I9V_002 not in the Motif Atlas

Homologous match to HL_5EL4_222

Geometric discrepancy: 0.3923

The information below is about HL_5EL4_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1I9V|1|A|G|30
1I9V|1|A|A|31
1I9V|1|A|C|32
1I9V|1|A|U|33
1I9V|1|A|G|34
1I9V|1|A|A|35
1I9V|1|A|A|36
1I9V|1|A|YG|37
1I9V|1|A|A|38
1I9V|1|A|C|40
*
1I9V|1|A|C|40

Current chains

Chain A

PHENYLALANINE TRANSFER RNA

Nearby chains