HL_1IBK_023

3D structure

PDB id

1IBK (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

CCCGCGAGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1IBK_023 not in the Motif Atlas

Homologous match to HL_6CZR_094

Geometric discrepancy: 0.5954

The information below is about HL_6CZR_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1IBK|1|A|C|1028
1IBK|1|A|C|1029
1IBK|1|A|C|1030
1IBK|1|A|G|1030|||A
1IBK|1|A|C|1030|||B
1IBK|1|A|G|1030|||C
1IBK|1|A|A|1030|||D
1IBK|1|A|G|1031
1IBK|1|A|G|1032

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains