HL_1IL2_002

3D structure

PDB id

1IL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate Complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

C(PSU)UGUC(1MG)CG

Length

9 nucleotides

Bulged bases

1IL2|1|C|U|933

QA status

Modified nucleotides: PSU, 1MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA anticodon loop with synthetase

Broad Annotation

Anticodon loop

Motif group

HL_69186.2

Basepair signature

cWW-cWW-F-F

Number of instances in this motif group

3

Unit IDs

1IL2|1|C|C|931
1IL2|1|C|PSU|932
1IL2|1|C|U|933
1IL2|1|C|G|934
1IL2|1|C|U|935
1IL2|1|C|C|936
1IL2|1|C|1MG|937
1IL2|1|C|C|938
1IL2|1|C|G|939

Current chains

Chain C

ASPARTYL TRANSFER RNA

Nearby chains

Chain A

ASPARTYL-TRNA SYNTHETASE