HL_1J1U_006
3D structure
- PDB id
- 1J1U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of archaeal tyrosyl-tRNA synthetase complexed with tRNA(Tyr) and L-tyrosine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.95 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33239.15
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 108
Unit IDs
1J1U|1|B|G|554||||4_556
1J1U|1|B|U|555||||4_556
1J1U|1|B|U|556||||4_556
1J1U|1|B|C|557||||4_556
1J1U|1|B|A|558||||4_556
1J1U|1|B|A|559||||4_556
1J1U|1|B|A|560||||4_556
1J1U|1|B|U|561||||4_556
1J1U|1|B|C|562||||4_556
Current chains
- Chain B
- tRNA(Tyr)
Nearby chains
No other chains within 10ÅColoring options: