HL_1JZX_047

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUGCAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1JZX_047 not in the Motif Atlas

Homologous match to HL_4WF9_045

Geometric discrepancy: 0.5115

The information below is about HL_4WF9_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZX|1|A|G|1854
1JZX|1|A|G|1855
1JZX|1|A|U|1856
1JZX|1|A|G|1857
1JZX|1|A|C|1858
1JZX|1|A|A|1859
1JZX|1|A|A|1860
1JZX|1|A|G|1861
1JZX|1|A|C|1862

Current chains

Chain A

23S rRNA

Nearby chains