HL_1JZX_067

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

1JZX|1|A|A|2795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1JZX_067 not in the Motif Atlas

Homologous match to HL_4WF9_064

Geometric discrepancy: 0.1391

The information below is about HL_4WF9_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.2

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

13

Unit IDs

1JZX|1|A|G|2794
1JZX|1|A|A|2795
1JZX|1|A|A|2796
1JZX|1|A|G|2797
1JZX|1|A|A|2798
1JZX|1|A|C|2799
1JZX|1|A|C|2800
1JZX|1|A|A|2801
1JZX|1|A|C|2802

Current chains

Chain A

23S rRNA

Nearby chains