HL_1JZZ_050

3D structure

PDB id

1JZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGUGGGAGAAACUGGCCGGUCGGUGGCCACC

Length

31 nucleotides

Bulged bases

1JZZ|1|A|G|2110, 1JZZ|1|A|C|2125, 1JZZ|1|A|G|2132

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZZ|1|A|G|2103
1JZZ|1|A|G|2104
1JZZ|1|A|U|2105
1JZZ|1|A|G|2106
1JZZ|1|A|G|2107
1JZZ|1|A|G|2108
1JZZ|1|A|A|2109
1JZZ|1|A|G|2110
1JZZ|1|A|A|2117
1JZZ|1|A|A|2118
1JZZ|1|A|A|2119
1JZZ|1|A|C|2120
1JZZ|1|A|U|2121
1JZZ|1|A|G|2122
1JZZ|1|A|G|2123
1JZZ|1|A|C|2124
1JZZ|1|A|C|2125
1JZZ|1|A|G|2132
1JZZ|1|A|G|2133
1JZZ|1|A|U|2134
1JZZ|1|A|C|2135
1JZZ|1|A|G|2136
1JZZ|1|A|G|2137
1JZZ|1|A|U|2138
1JZZ|1|A|G|2139
1JZZ|1|A|G|2140
1JZZ|1|A|C|2157
1JZZ|1|A|C|2158
1JZZ|1|A|A|2159
1JZZ|1|A|C|2160
1JZZ|1|A|C|2161

Current chains

Chain A

23S rRNA

Nearby chains