HL_1K01_036

3D structure

PDB id

1K01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AAGCUAUGGCUAUGCU

Length

16 nucleotides

Bulged bases

1K01|1|A|U|1475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1K01|1|A|A|1463
1K01|1|A|A|1464
1K01|1|A|G|1465
1K01|1|A|C|1466
1K01|1|A|U|1467
1K01|1|A|A|1468
1K01|1|A|U|1469
1K01|1|A|G|1470
1K01|1|A|G|1471
1K01|1|A|C|1472
1K01|1|A|U|1473
1K01|1|A|A|1474
1K01|1|A|U|1475
1K01|1|A|G|1476
1K01|1|A|C|1477
1K01|1|A|U|1478

Current chains

Chain A

23S rRNA

Nearby chains