HL_1K01_072

3D structure

PDB id

1K01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UCAAGUGGAGCGGUGCAAGCUGCGAAAUGAAG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1K01|1|A|U|1843
1K01|1|A|C|1844
1K01|1|A|A|1845
1K01|1|A|A|1846
1K01|1|A|G|1847
1K01|1|A|U|1848
1K01|1|A|G|1849
1K01|1|A|G|1850
1K01|1|A|A|1851
1K01|1|A|G|1852
1K01|1|A|C|1853
1K01|1|A|G|1854
1K01|1|A|G|1855
1K01|1|A|U|1856
1K01|1|A|G|1857
1K01|1|A|C|1858
1K01|1|A|A|1859
1K01|1|A|A|1860
1K01|1|A|G|1861
1K01|1|A|C|1862
1K01|1|A|U|1863
1K01|1|A|G|1864
1K01|1|A|C|1865
1K01|1|A|G|1866
1K01|1|A|A|1867
1K01|1|A|A|1868
1K01|1|A|A|1869
1K01|1|A|U|1870
1K01|1|A|G|1871
1K01|1|A|A|1872
1K01|1|A|A|1873
1K01|1|A|G|1874

Current chains

Chain A

23S rRNA

Nearby chains