HL_1KC8_044
3D structure
- PDB id
- 1KC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.01 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 1KC8|1|A|U|1771
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1KC8_044 not in the Motif Atlas
- Geometric match to HL_4V9F_044
- Geometric discrepancy: 0.056
- The information below is about HL_4V9F_044
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
1KC8|1|A|C|1769
1KC8|1|A|U|1770
1KC8|1|A|U|1771
1KC8|1|A|C|1772
1KC8|1|A|G|1773
1KC8|1|A|G|1774
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain 1
- RIBOSOMAL PROTEIN L37Ae
Coloring options: