HL_1M1K_075
3D structure
- PDB id
- 1M1K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UACCCAUCCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 1M1K|1|B|C|3040
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1M1K_075 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.0531
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
1M1K|1|B|U|3033
1M1K|1|B|A|3034
1M1K|1|B|C|3035
1M1K|1|B|C|3036
1M1K|1|B|C|3037
1M1K|1|B|A|3038
1M1K|1|B|U|3039
1M1K|1|B|C|3040
1M1K|1|B|C|3041
1M1K|1|B|C|3042
1M1K|1|B|G|3043
1M1K|1|B|A|3044
1M1K|1|B|A|3045
1M1K|1|B|C|3046
1M1K|1|B|A|3047
Current chains
- Chain B
- 5S RRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- RIBOSOMAL PROTEIN L5
- Chain O
- RIBOSOMAL PROTEIN L18
Coloring options: