HL_1MMS_001

3D structure

PDB id

1MMS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the ribosomal PROTEIN L11-RNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.57 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases (A, C, G, U)

1070A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07145.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

1MMS|1|C|C|1064
1MMS|1|C|U|1065
1MMS|1|C|U|1066
1MMS|1|C|A|1067
1MMS|1|C|G|1068
1MMS|1|C|A|1069
1MMS|1|C|A|1070
1MMS|1|C|G|1071
1MMS|1|C|C|1072
1MMS|1|C|A|1073
1MMS|1|C|G|1074

Current chains

Chain C

23S RIBOSOMAL RNA

Nearby chains

Chain A

PROTEIN (RIBOSOMAL PROTEIN L11)

Chain D

23S RIBOSOMAL RNA