HL_1MT4_014

3D structure

PDB id

1MT4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S ribosomal RNA hairpin 35

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CGUUGAAAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1MT4_014 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1626

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

1MT4|14|A|C|8
1MT4|14|A|G|9
1MT4|14|A|U|10
1MT4|14|A|U|11
1MT4|14|A|G|12
1MT4|14|A|A|13
1MT4|14|A|A|14
1MT4|14|A|A|15
1MT4|14|A|A|16
1MT4|14|A|G|17

Current chains

Chain A

23S ribosomal Hairpin 35

Nearby chains