3D structure

PDB id
1MZP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the L1 protuberance in the ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

1MZP|1|B|C|25
1MZP|1|B|G|26
1MZP|1|B|C|27
1MZP|1|B|A|28
1MZP|1|B|A|29
1MZP|1|B|G|30

Current chains

Chain B
fragment of 23S rRNA

Nearby chains

Chain A
50s ribosomal protein L1P

Coloring options:

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